Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946220.1_cds_XP_016488447.1_79081
CDS Infomation

[gene=LOC107808438] [db_xref=GeneID:107808438] [protein=BTB/POZ domain-containing protein POB1-like] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016488447.1] [location=complement(join(20648..21461,21862..22141,22404..22467,22557..22678,23885..24007,24626..>24836))] [gbkey=CDS]
Sequence

GATCAGAATTTGGATCTTTTCGACCCGAGAACGGCTATAATGGATCCGGGATACTCTCCT
AACCGTGCCCGGGACCCCGATTTCGGGTTTGCATTCAACGACAGCAACTTCTCCGACCGT
CTCCTCCGAATCGAGATTATGGCCGACCTGCTCGACCCCGAGGGCTTTCATTGTCAGAGT
CTAGCTGATTGGGCCCGCAATCGCAAACGACCTTTGGATATCACTGCATGCCCTGAAGAG
CAGATTATAAGCTGTAACCAAATTTATACTGAAGATGCTGAGAATGAAAATCAAGATGAG
TCAGTTGTTGCAATGATCGAAGAACCACACTCAGGAGATGAAGCTGCTAACACTGATGAT
TCATCTTGGAACTTTGATTCTCCAAGAGTTGTTAAAGTTAAAACCTTACATATCAGCTCC
CCAATTTTAGCAGCAAGAAGCCCATTCTTCTACAAGCTCTTCTCCAATGGGATGAGGGAG
TCTGAGCAAAGACAAGTAACTCTAAGAATTAATGCTTCAGAGGAAGCTGCACTGATGGAG
CTCCTGAATTTTATGTATAGCAATACATTGACCACTGATACAGCGCCTGCTTTATTGGAT
GTACTCATGGCTGCCGACAAGTTTGAAGTTGCTTCTTGCATGCGGTATTGCAGCCGGCAA
CTGCGTAATTTACCAATGACTCCAGAGTCCGCTTTGCTGTATTTGGAGCTTCCTTCTAGC
GTCCTGATGGCTGAAGCTGTTCAGCCATTGACTGATGCCGCAGAACAATTCCTAGCTGCA
AGATACAAAGATATTACCAAGTTTCAGGAAGAGGTTATGAAGTTGCCTCTTGCTGGAGTA
GAGGCTATTTTGTCCAGTGATGACCTCCAGGTAGCATCAGAGGATACAGTGTACGACTTC
GTGTTGAAGTGGACAAGGGCTCATTATCCACAGTTTGAGGAACGACGAGAAATCCTTGGT
TCGCGACTTGGTCGTTGCATCCGTTTTCCTTTCATGAGTTGTCGAAAGCTTCGGAAGGTT
CTGGCATGTAATGACTTTGATCATGAATTTGCATCCAAGCTTGTTCTTGAGGCCCTCTTT
TATAAAGCTGAGGCCCCTCATCGTCAGCGAAACCAAGCTGCAGAAGAATCGTCATCACCT
AGTCGTCGTTTTGTGGAGCGTTCTTACAAGTATCGACCTGTCAAGGTGGTTGATTTTGAA
CTTCCACGGCAACAATGTGTAGTCTACCTGGATCTTAAGCGGGAGGAATGTGCTAACCTT
TTCCCTTCAGGAAGAGTGTATTCTCAAGCATTTCATTTAGGGGGACAAGGGTTTTTCCTG
TCTGCACATTGCAACATGGATCAGCAAAGCTCTTTCCATTGTTTTGGTCTCTTTCTGGGT
ATGCAGGAAAAGGGTTCTGTTGCTTTTGCTGTTGATTACGAATTTGCAGCAAGAACAAAA
CCAGGAGAGGAGTATGTCAGCAAATACAAAGGTAACTACACTTTTACGGGGGGCAAGGCA
GTTGGCTACCGCAATCTATTTGCCATACCATGGCCTTCTTTCATCGCTGAGGACAGTCCA
TATTTTATTAACGGTATGCTCCATCTCAGGGCTGAACTTACTATCAGGAACTGA

Peptide Sequence

PEP ID

XP_016488447.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein POB1-like [Nicotiana tabacum]
Sequence

MMDQNLDLFDPRTAIMDPGYSPNRARDPDFGFAFNDSNFSDRLLRIEIMADLLDPEGFHC
QSLADWARNRKRPLDITACPEEQIISCNQIYTEDAENENQDESVVAMIEEPHSGDEAANT
DDSSWNFDSPRVVKVKTLHISSPILAARSPFFYKLFSNGMRESEQRQVTLRINASEEAAL
MELLNFMYSNTLTTDTAPALLDVLMAADKFEVASCMRYCSRQLRNLPMTPESALLYLELP
SSVLMAEAVQPLTDAAEQFLAARYKDITKFQEEVMKLPLAGVEAILSSDDLQVASEDTVY
DFVLKWTRAHYPQFEERREILGSRLGRCIRFPFMSCRKLRKVLACNDFDHEFASKLVLEA
LFYKAEAPHRQRNQAAEESSSPSRRFVERSYKYRPVKVVDFELPRQQCVVYLDLKREECA
NLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVAFAVDYEFAAR
TKPGEEYVSKYKGNYTFTGGKAVGYRNLFAIPWPSFIAEDSPYFINGMLHLRAELTIRN

Transcript Sequence

Gene sequence data has not been registered.